Gráficos con ggplot2 (C): Tipos de gráficos

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<br>

#### Programación y manejo de datos con R (Slides 06-C)

## Gráficos con ggplot2 (C): Tipos de gráficos

<br>

### Pedro J. Pérez

#### 2020, septiembre

###### (actualizadas el 04-09-2023)

<br><br>
  
#### e-mail: [pedro.j.perez@uv.es](mailto:pedro.j.perez@uv.es)
  
#### Web del curso: [https://perezp44.github.io/intro-ds-23-24-web](https://perezp44.github.io/intro-ds-23-24-web)

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## 6. Distintos tipos de gráficos

<html><div style='float:left'></div><hr color='#EB811B' size=1px width=796px></html>

#### Mientrás entendiamos el funcionamiento de ggplot2 nos centramos en un sólo tipo de gráfico: los gráficos de puntos.

#### Ahora veremos distintos tipos de gráficos: histogramas, scatter plots, gráficos de cajas, de barras, de lineas etc... etc...

---

##### Galerías con ejemplos

En estas slides presentaremos ejemplos de algunos de los gráficos más utilizados en el análisis de datos. Puedes ver listados más completos en:

- [[R-graph gallery]](https://www.r-graph-gallery.com/): Impresionante!!

- [[Top 50 ggplot2 Visualizations (With Full R Code)]](http://r-statistics.co/Top50-Ggplot2-Visualizations-MasterList-R-Code.html):de r-statistics.co, más básico pero muy didáctico.

- [[Extensiones ggplot2]](https://exts.ggplot2.tidyverse.org/): Impresionante!!

- [[R-graph gallery - ggplot2 package]](http://r-graph-gallery.com/ggplot2-package.html): otra vez, impresionante!!

<br>

Evidentemente, **el tipo de grafico se ha de elegir en función de la información que se quiere mostrar**. [[Aquí]](https://coolinfographics.com/dataviz-guides) puedes encontrar ayuda para elegir el tipo de grafico. Por ejemplo:

[[The Data Visualisation Catalogue]](https://datavizcatalogue.com/), [[The chart chooser]](https://extremepresentation.com/design/7-charts/), [[The Chart Chooser Dissected]](https://blog.qlik.com/third-pillar-of-mapping-data-to-visualizations-usage), [[The Chart Chooser: Interactive Version]](http://labs.juiceanalytics.com/chartchooser/index.html), etc ...

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background-image: url(imagenes/ss_06_img_01_ggplot2-hex.png)
background-position: 95% 5%
background-size: 7%

### 6.1 Histogramas

<html><div style='float:left'></div><hr color='#EB811B' size=1px width=796px></html>

#### Se utilizan para mostrar la distribución de UNA variable continua, por ejemplo la longitud del sépalo (Sepal.Length).

<br>

<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/unnamed-chunk-4-1.png" width="45%" style="display: block; margin: auto;" />

---

count: false
 
##### 6.1 Histogramas con geom_histogram()
.panel1-grafico-15-auto[

```r
*ggplot(iris, aes(Sepal.Length))
```
]
 
.panel2-grafico-15-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-15_auto_01_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.1 Histogramas con geom_histogram()
.panel1-grafico-15-auto[

```r
ggplot(iris, aes(Sepal.Length)) +
*geom_histogram(bins = 60) + labs(title = "60 intervalos (o bins)")
```
]
 
.panel2-grafico-15-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-15_auto_02_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.1 Histogramas con geom_histogram()
.panel1-grafico-15-auto[

```r
ggplot(iris, aes(Sepal.Length)) +
geom_histogram(bins = 60) + labs(title = "60 intervalos (o bins)") +
*geom_histogram(bins = 40) + labs(title = "40 intervalos")
```
]
 
.panel2-grafico-15-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-15_auto_03_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.1 Histogramas con geom_histogram()
.panel1-grafico-15-auto[

```r
ggplot(iris, aes(Sepal.Length)) +
geom_histogram(bins = 60) + labs(title = "60 intervalos (o bins)") +
geom_histogram(bins = 40) + labs(title = "40 intervalos") +
*geom_histogram(binwidth = 0.5) + labs(title = "En lugar de elegir el nº de intervalos, \n se puede elegir la anchura del intervalo: \n binwidth =  0.5")
```
]
 
.panel2-grafico-15-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-15_auto_04_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.1 Histogramas con geom_histogram()
.panel1-grafico-15-auto[

```r
ggplot(iris, aes(Sepal.Length)) +
geom_histogram(bins = 60) + labs(title = "60 intervalos (o bins)") +
geom_histogram(bins = 40) + labs(title = "40 intervalos") +
geom_histogram(binwidth = 0.5) + labs(title = "En lugar de elegir el nº de intervalos, \n se puede elegir la anchura del intervalo: \n binwidth =  0.5") +
*geom_histogram(binwidth = 0.5,
*              color = "black",
*              fill = "tomato") + labs(title = "binwidth =  0.5, color = black, fill = tomato")
```
]
 
.panel2-grafico-15-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-15_auto_05_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.1 Histogramas con geom_histogram()
.panel1-grafico-15-auto[

```r
ggplot(iris, aes(Sepal.Length)) +
geom_histogram(bins = 60) + labs(title = "60 intervalos (o bins)") +
geom_histogram(bins = 40) + labs(title = "40 intervalos") +
geom_histogram(binwidth = 0.5) + labs(title = "En lugar de elegir el nº de intervalos, \n se puede elegir la anchura del intervalo: \n binwidth =  0.5") +
geom_histogram(binwidth = 0.5,
               color = "black",
               fill = "tomato") + labs(title = "binwidth =  0.5, color = black, fill = tomato") +
*geom_histogram(binwidth = 0.5,
*              aes(fill = Species),
*              color = "black") + labs(title = "binwidth =  0.5, color = black, aes(fill = Species)")
```
]
 
.panel2-grafico-15-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-15_auto_06_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.1 Histogramas con geom_histogram()
.panel1-grafico-15-auto[

```r
ggplot(iris, aes(Sepal.Length)) +
geom_histogram(bins = 60) + labs(title = "60 intervalos (o bins)") +
geom_histogram(bins = 40) + labs(title = "40 intervalos") +
geom_histogram(binwidth = 0.5) + labs(title = "En lugar de elegir el nº de intervalos, \n se puede elegir la anchura del intervalo: \n binwidth =  0.5") +
geom_histogram(binwidth = 0.5,
               color = "black",
               fill = "tomato") + labs(title = "binwidth =  0.5, color = black, fill = tomato") +
geom_histogram(binwidth = 0.5,
               aes(fill = Species),
               color = "black") + labs(title = "binwidth =  0.5, color = black, aes(fill = Species)") +
*facet_grid(cols = vars(Species))
```
]
 
.panel2-grafico-15-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-15_auto_07_output-1.png" width="95%" style="display: block; margin: auto;" />
]

<style>
.panel1-grafico-15-auto {
  color: black;
  width: 38.6060606060606%;
  hight: 32%;
  float: left;
  padding-left: 1%;
  font-size: 80%
}
.panel2-grafico-15-auto {
  color: black;
  width: 59.3939393939394%;
  hight: 32%;
  float: left;
  padding-left: 1%;
  font-size: 80%
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.panel3-grafico-15-auto {
  color: black;
  width: NA%;
  hight: 33%;
  float: left;
  padding-left: 1%;
  font-size: 80%
}
</style>

---
##### 6.1 geom_density() y Joy Division plots

```r
ggplot(iris, aes(Sepal.Length, fill = Species)) + geom_density(position = "stack", alpha = 0.5) 
ggplot(iris, aes(x = Sepal.Length, y = Species)) + 
      ggridges::geom_density_ridges(aes(fill = Species), alpha = 0.5)

```

<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/unnamed-chunk-6-1.png" width="85%" style="display: block; margin: auto;" />

---

count: false
 
##### 6.3 Gráficos de caja (Boxplots)
.panel1-grafico-16-auto[

```r
*ggplot(iris, aes(x = Species,  y = Sepal.Length))
```
]
 
.panel2-grafico-16-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-16_auto_01_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.3 Gráficos de caja (Boxplots)
.panel1-grafico-16-auto[

```r
ggplot(iris, aes(x = Species,  y = Sepal.Length)) +
*geom_boxplot()
```
]
 
.panel2-grafico-16-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-16_auto_02_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.3 Gráficos de caja (Boxplots)
.panel1-grafico-16-auto[

```r
ggplot(iris, aes(x = Species,  y = Sepal.Length)) +
geom_boxplot() +
*geom_boxplot(aes(fill = Species),
*            outlier.colour = "purple")
```
]
 
.panel2-grafico-16-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-16_auto_03_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.3 Gráficos de caja (Boxplots)
.panel1-grafico-16-auto[

```r
ggplot(iris, aes(x = Species,  y = Sepal.Length)) +
geom_boxplot() +
geom_boxplot(aes(fill = Species),
             outlier.colour = "purple") +
*geom_jitter(width = 0.15, alpha = 1/4, color = "tomato")
```
]
 
.panel2-grafico-16-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-16_auto_04_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.3 Gráficos de caja (Boxplots)
.panel1-grafico-16-auto[

```r
ggplot(iris, aes(x = Species,  y = Sepal.Length)) +
geom_boxplot() +
geom_boxplot(aes(fill = Species),
             outlier.colour = "purple") +
geom_jitter(width = 0.15, alpha = 1/4, color = "tomato") +
*stat_summary(fun = "mean", geom = "point", color = "purple", size = 2.5)
```
]
 
.panel2-grafico-16-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-16_auto_05_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.3 Gráficos de caja (Boxplots)
.panel1-grafico-16-auto[

```r
ggplot(iris, aes(x = Species,  y = Sepal.Length)) +
geom_boxplot() +
geom_boxplot(aes(fill = Species),
             outlier.colour = "purple") +
geom_jitter(width = 0.15, alpha = 1/4, color = "tomato") +
stat_summary(fun = "mean", geom = "point", color = "purple", size = 2.5) +
*geom_violin(aes(fill = Species), alpha = 0.6)
```
]
 
.panel2-grafico-16-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-16_auto_06_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.3 Gráficos de caja (Boxplots)
.panel1-grafico-16-auto[

```r
ggplot(iris, aes(x = Species,  y = Sepal.Length)) +
geom_boxplot() +
geom_boxplot(aes(fill = Species),
             outlier.colour = "purple") +
geom_jitter(width = 0.15, alpha = 1/4, color = "tomato") +
stat_summary(fun = "mean", geom = "point", color = "purple", size = 2.5) +
geom_violin(aes(fill = Species), alpha = 0.6) +
*coord_flip()
```
]
 
.panel2-grafico-16-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-16_auto_07_output-1.png" width="95%" style="display: block; margin: auto;" />
]

<style>
.panel1-grafico-16-auto {
  color: black;
  width: 38.6060606060606%;
  hight: 32%;
  float: left;
  padding-left: 1%;
  font-size: 80%
}
.panel2-grafico-16-auto {
  color: black;
  width: 59.3939393939394%;
  hight: 32%;
  float: left;
  padding-left: 1%;
  font-size: 80%
}
.panel3-grafico-16-auto {
  color: black;
  width: NA%;
  hight: 33%;
  float: left;
  padding-left: 1%;
  font-size: 80%
}
</style>

---

count: false
 
##### 6.4 Gráficos de barra (Boxplots)
.panel1-grafico-17-auto[

```r
*ggplot(mpg, aes(class))
```
]
 
.panel2-grafico-17-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-17_auto_01_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.4 Gráficos de barra (Boxplots)
.panel1-grafico-17-auto[

```r
ggplot(mpg, aes(class)) +
*geom_bar()
```
]
 
.panel2-grafico-17-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-17_auto_02_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.4 Gráficos de barra (Boxplots)
.panel1-grafico-17-auto[

```r
ggplot(mpg, aes(class)) +
geom_bar() +
*geom_bar(fill = "steelblue")
```
]
 
.panel2-grafico-17-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-17_auto_03_output-1.png" width="95%" style="display: block; margin: auto;" />
]

---
count: false
 
##### 6.4 Gráficos de barra (Boxplots)
.panel1-grafico-17-auto[

```r
ggplot(mpg, aes(class)) +
geom_bar() +
geom_bar(fill = "steelblue") +
*coord_flip()
```
]
 
.panel2-grafico-17-auto[
<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/grafico-17_auto_04_output-1.png" width="95%" style="display: block; margin: auto;" />
]

<style>
.panel1-grafico-17-auto {
  color: black;
  width: 38.6060606060606%;
  hight: 32%;
  float: left;
  padding-left: 1%;
  font-size: 80%
}
.panel2-grafico-17-auto {
  color: black;
  width: 59.3939393939394%;
  hight: 32%;
  float: left;
  padding-left: 1%;
  font-size: 80%
}
.panel3-grafico-17-auto {
  color: black;
  width: NA%;
  hight: 33%;
  float: left;
  padding-left: 1%;
  font-size: 80%
}
</style>

---
##### 6.4 Gráficos de barra (Boxplots): distintas posiciones para las barras

Para esta subsección utilizaremos el data.frame `mtcars`

```r
p <- ggplot(mtcars, aes(factor(cyl), fill = factor(vs)))
p + geom_bar() 
p + geom_bar(position = "fill")
p + geom_bar(position = "dodge")
p + geom_bar(position = position_dodge2(preserve = "single"))
```

<img src="data:image/png;base64,#slides_06_ggplot2_C_files/figure-html/unnamed-chunk-8-1.png" width="98%" style="display: block; margin: auto;" />

---
class: inverse, center, middle

## 9. Gráficos interactivos

<html><div style='float:left'></div><hr color='#EB811B' size=1px width=796px></html>

Permiten al usuario interactuar con el gráfico, abriéndose posibilidades como: zooming, highlight, o mostrar información adicional al pinchar en algún elemento del gráfico, etc …

---
##### 9. Gráficos interactivos

- Los gráficos interactivos permiten al usuario interactuar con el gráfico.

- En general, JavaScript (JS) es el lenguaje utilizado para hacer gráficos interactivos con librerías como D3, Chart, Plotly, Vis Highcharts, …

- Recientemente, el paquete de R htmlwidgets ha facilitado el uso de las librerías de JS en R.

- Actualmente, paquetes de R, como leaflet, DT, dygraphs, networkD3 y muchos otros, utilizan el framework propuesto por htmlwidgets para hacer disponibles los gráficos interactivos de JS en R. [[Aquí]](http://gallery.htmlwidgets.org/) puede ver los pkgs que usar htmlwidgets

- [[Aquí]](https://www.r-graph-gallery.com/interactive-charts.html) puedes ver una galería con ejemplos.

---
##### 9. Gráficos interactivos (**plotly**)

- Un bookdown sobre plotly: <https://plotly-r.com/preface.html>

```r
library(plotly)
p <- ggplot(iris, aes(Sepal.Length, Petal.Length, color = Species)) +  geom_point() + geom_smooth()
ggplotly(p)
```

<div class="plotly html-widget html-fill-item-overflow-hidden html-fill-item" id="htmlwidget-3533de4febdf46e9ded7" style="width:95%;height:392px;"></div>
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setosa","Sepal.Length: 4.6<br />Petal.Length: 1.4<br />Species: setosa","Sepal.Length: 5.3<br />Petal.Length: 1.5<br />Species: setosa","Sepal.Length: 5.0<br />Petal.Length: 1.4<br />Species: 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5.7<br />Species: virginica","Sepal.Length: 6.7<br />Petal.Length: 5.2<br />Species: virginica","Sepal.Length: 6.3<br />Petal.Length: 5.0<br />Species: virginica","Sepal.Length: 6.5<br />Petal.Length: 5.2<br />Species: virginica","Sepal.Length: 6.2<br />Petal.Length: 5.4<br />Species: virginica","Sepal.Length: 5.9<br />Petal.Length: 5.1<br />Species: 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/>Petal.Length: 1.484406<br />Species: setosa","Sepal.Length: 5.515190<br />Petal.Length: 1.488929<br />Species: setosa","Sepal.Length: 5.496203<br />Petal.Length: 1.493060<br />Species: setosa","Sepal.Length: 5.477215<br />Petal.Length: 1.496794<br />Species: setosa","Sepal.Length: 5.458228<br />Petal.Length: 1.500126<br />Species: setosa","Sepal.Length: 5.439241<br />Petal.Length: 1.503052<br />Species: setosa","Sepal.Length: 5.420253<br />Petal.Length: 1.505567<br />Species: setosa","Sepal.Length: 5.401266<br />Petal.Length: 1.507667<br />Species: setosa","Sepal.Length: 5.382278<br />Petal.Length: 1.509545<br />Species: setosa","Sepal.Length: 5.363291<br />Petal.Length: 1.511428<br />Species: setosa","Sepal.Length: 5.344304<br />Petal.Length: 1.513277<br />Species: setosa","Sepal.Length: 5.325316<br />Petal.Length: 1.515050<br />Species: setosa","Sepal.Length: 5.306329<br />Petal.Length: 1.516706<br />Species: setosa","Sepal.Length: 5.287342<br />Petal.Length: 1.518204<br />Species: setosa","Sepal.Length: 5.268354<br />Petal.Length: 1.519503<br />Species: setosa","Sepal.Length: 5.249367<br />Petal.Length: 1.520562<br />Species: setosa","Sepal.Length: 5.230380<br />Petal.Length: 1.521339<br />Species: setosa","Sepal.Length: 5.211392<br />Petal.Length: 1.521793<br />Species: setosa","Sepal.Length: 5.192405<br />Petal.Length: 1.521671<br />Species: setosa","Sepal.Length: 5.173418<br />Petal.Length: 1.519331<br />Species: setosa","Sepal.Length: 5.154430<br />Petal.Length: 1.515274<br />Species: setosa","Sepal.Length: 5.135443<br />Petal.Length: 1.510543<br />Species: setosa","Sepal.Length: 5.116456<br />Petal.Length: 1.506181<br />Species: setosa","Sepal.Length: 5.097468<br />Petal.Length: 1.503199<br />Species: setosa","Sepal.Length: 5.078481<br />Petal.Length: 1.500224<br />Species: setosa","Sepal.Length: 5.059494<br />Petal.Length: 1.496531<br />Species: setosa","Sepal.Length: 5.040506<br />Petal.Length: 1.492761<br />Species: setosa","Sepal.Length: 5.021519<br 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7.026582<br />Petal.Length: 5.764224<br />Species: virginica","Sepal.Length: 6.988608<br />Petal.Length: 5.725245<br />Species: virginica","Sepal.Length: 6.950633<br />Petal.Length: 5.688785<br />Species: virginica","Sepal.Length: 6.912658<br />Petal.Length: 5.655253<br />Species: virginica","Sepal.Length: 6.874684<br />Petal.Length: 5.625708<br />Species: virginica","Sepal.Length: 6.836709<br />Petal.Length: 5.601668<br />Species: virginica","Sepal.Length: 6.798734<br />Petal.Length: 5.581556<br />Species: virginica","Sepal.Length: 6.760759<br />Petal.Length: 5.563585<br />Species: virginica","Sepal.Length: 6.722785<br />Petal.Length: 5.545973<br />Species: virginica","Sepal.Length: 6.684810<br />Petal.Length: 5.528121<br />Species: virginica","Sepal.Length: 6.646835<br />Petal.Length: 5.518191<br />Species: virginica","Sepal.Length: 6.608861<br />Petal.Length: 5.514113<br />Species: virginica","Sepal.Length: 6.570886<br />Petal.Length: 5.510961<br />Species: virginica","Sepal.Length: 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---
##### 9. Gráficos interactivos (**plotly**)

```r
p1 <- p + facet_grid(cols = vars(Species)) 
ggplotly(p1)
```

<div class="plotly html-widget html-fill-item-overflow-hidden html-fill-item" id="htmlwidget-849b72887974029839a0" style="width:95%;height:392px;"></div>
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4.626092<br />Species: versicolor","Sepal.Length: 6.601266<br />Petal.Length: 4.635427<br />Species: versicolor","Sepal.Length: 6.627848<br />Petal.Length: 4.645410<br />Species: versicolor","Sepal.Length: 6.654430<br />Petal.Length: 4.655605<br />Species: versicolor","Sepal.Length: 6.681013<br />Petal.Length: 4.666021<br />Species: versicolor","Sepal.Length: 6.707595<br />Petal.Length: 4.676666<br />Species: versicolor","Sepal.Length: 6.734177<br />Petal.Length: 4.687551<br />Species: versicolor","Sepal.Length: 6.760759<br />Petal.Length: 4.698685<br />Species: versicolor","Sepal.Length: 6.787342<br />Petal.Length: 4.710076<br />Species: versicolor","Sepal.Length: 6.813924<br />Petal.Length: 4.721733<br />Species: versicolor","Sepal.Length: 6.840506<br />Petal.Length: 4.733667<br />Species: versicolor","Sepal.Length: 6.867089<br />Petal.Length: 4.745886<br />Species: versicolor","Sepal.Length: 6.893671<br />Petal.Length: 4.758399<br />Species: versicolor","Sepal.Length: 6.920253<br 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